Search results for "fusion [photon photon]"

showing 10 items of 724 documents

Crystallization and Preliminary X-Ray Analysis of Rotavirus Protein VP6

1998

ABSTRACT As a first step to gain insight into the structure of the rotavirus virion at atomic resolution, we report here the expression, purification, and crystallization of recombinant rotavirus protein VP6. This protein has the property of polymerizing in the form of tubular structures in solution which have hindered crystallization thus far. Using a combination of electron microscopy and small-angle X-ray scattering, we found that addition of Ca 2+ at concentrations higher than 100 mM results in depolymerization of the tubes, leading to an essentially monodisperse solution of trimeric VP6 even at high protein concentrations (higher than 10 mg/ml), thereby enabling us to search for crysta…

RotavirusProtein ConformationvirusesRecombinant Fusion ProteinsImmunologyDispersityGene ExpressionTrimerSpodopteraBiologyCrystallography X-RayMicrobiologylaw.inventionchemistry.chemical_compoundCapsidProtein structurelawVirologyAnimal VirusesAnimalsCrystallizationAntigens ViralDepolymerizationResolution (electron density)virus diseasesCrystallographyMonomerBiochemistrychemistryPolymerizationInsect ScienceCapsid ProteinsCattleCrystallizationJournal of Virology
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Rotavirus-Specific Cytotoxic T Lymphocytes Recognize Overlapping Epitopes in the Amino-Terminal Region of the VP7 Glycoprotein

1999

Abstract Rotavirus-specific cytotoxic T lymphocytes (CTL) play an important role in the resolution of rotavirus infection. The outer capsid glycoprotein, VP7, elicits a class I MHC-restricted CTL response. Vaccinia virus recombinants expressing the VP7 genes from simian rotavirus SA11 (serotype G3) and from the RF strain of bovine rotavirus (serotype G6) were used to analyze the CTL activity to this antigen in BALB/c (H-2 d ) and C57BL/6 (H-2 b ) mice neonatally infected with homologous and heterologous rotaviruses. A vaccinia virus recombinant expressing the first amino-terminal 88 amino acids of VP7 was constructed and used to search for cross-reactive CTL against this region of the prote…

RotavirusRecombinant Fusion ProteinsvirusesGenetic VectorsEpitopes T-LymphocyteGene ExpressionVaccinia virusBiologymedicine.disease_causeVirusEpitopeMicechemistry.chemical_compoundCapsidfluids and secretionsAntigenVirologyRotavirusmedicineAnimalsCytotoxic T cellAntigens ViralGlycoproteinschemistry.chemical_classificationMice Inbred BALB CVaccines SyntheticVaccinationH-2 Antigensvirus diseasesViral VaccinesVirologyMolecular biologyMice Inbred C57BLCTL*Animals NewbornchemistryCapsid ProteinsCattleVacciniaPeptidesGlycoproteinT-Lymphocytes CytotoxicVirology
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Bromodomain factor 1 (Bdf1) protein interacts with histones

2001

AbstractUsing a yeast two-hybrid assay we detected an interaction between the N-terminal region of histone H4 (amino acids 1–59) and a fragment of the bromodomain factor 1 protein (Bdf1p) (amino acids 304–571) that includes one of the two bromodomains of this protein. No interaction was observed using fragments of histone H4 sequence smaller than the first 59 amino acids. Recombinant Bdf1p (rBdf1p) demonstrates binding affinity for histones H4 and H3 but not H2A and H2B in vitro. Moreover, rBdf1p is able to bind histones H3 and H4 having different degrees of acetylation. Finally, we have not detected histone acetyltransferase activity associated with Bdf1p.

Saccharomyces cerevisiae ProteinsRecombinant Fusion ProteinsBiophysicsBromodomainTwo-hybridBiochemistryFungal ProteinsHistonesHistone H4SaccharomycesAcetyltransferasesGenes ReporterStructural BiologyTwo-Hybrid System TechniquesHistone methylationHistone H2AGeneticsHistone acetyltransferase activityHistone octamerMolecular BiologyHistone AcetyltransferasesBromodomain factor 1 proteinbiologyChemistryCell BiologyHistone acetyltransferasePeptide FragmentsChromatinBromodomainHistoneBiochemistryPCAFbiology.proteinHistone acetyltransferaseProtein BindingTranscription FactorsFEBS Letters
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The C-terminal region of the Hot1 transcription factor binds GGGACAAA-related sequences in the promoter of its target genes

2015

Response to hyperosmotic stress in the yeast Saccharomyces cerevisiae involves the participation of the general stress response mediated by Msn2/4 transcription factors and the HOG pathway. One of the transcription factors activated through this pathway is Hot1, which contributes to the control of the expression of several genes involved in glycerol synthesis and flux, or in other functions related to adaptation to adverse conditions. This work provides new data about the interaction mechanism of this transcription factor with DNA. By means of one-hybrid and electrophoretic mobility assays, we demonstrate that the C-terminal region, which corresponds to amino acids 610-719, is the DNA-bindi…

Saccharomyces cerevisiae ProteinsRecombinant Fusion ProteinsGenes FungalMolecular Sequence DataResponse elementBiophysicsE-boxSequence alignmentSaccharomyces cerevisiaeBiologyBiochemistryConserved sequenceOsmoregulationStructural BiologyGene Expression Regulation FungalGeneticsComputer SimulationAmino Acid SequenceDNA FungalPromoter Regions GeneticMolecular BiologyTranscription factorConserved SequenceSequence DeletionCis-regulatory moduleGeneticsBinding SitesBase SequenceSequence Homology Amino AcidMembrane Transport ProteinsPromoterDNA-binding domainProtein Structure TertiaryMutationSequence AlignmentProtein BindingTranscription FactorsBiochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
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Convergence of the target of rapamycin and the Snf1 protein kinase pathways in the regulation of the subcellular localization of Msn2, a transcriptio…

2002

The subcellular localization of Msn2, a transcriptional activator of STRE (stress response element)-regulated genes, is modulated by carbon source availability. In cells growing in glucose, Msn2 is located mainly in the cytosol, whereas in carbon source-starved cells, Msn2 is located largely inside the nucleus. However, in cells lacking Reg1 (the regulatory subunit of the Reg1/Glc7 protein phosphatase complex), the regulation of subcellular distribution is absent, Msn2 being constitutively present in the cytosol. The localization defect in these mutants is specific for carbon starvation stress, and it is because of the presence of an abnormally active Snf1 protein kinase that inhibits the n…

Saccharomyces cerevisiae ProteinsRecombinant Fusion ProteinsSaccharomyces cerevisiaeMitogen-activated protein kinase kinaseBiologyProtein Serine-Threonine KinasesBiochemistryASK1Molecular BiologyDNA PrimersSirolimusMAP kinase kinase kinaseBase SequenceKinaseCell BiologySubcellular localizationCarbonCell biologyCulture MediaDNA-Binding ProteinsCytosolBiochemistryTrans-ActivatorsCyclin-dependent kinase 9Nuclear localization sequenceSubcellular FractionsTranscription FactorsThe Journal of biological chemistry
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Genetic analysis of maintenance and expression of L and M double-stranded RNAs from yeast killer virus K28

1992

The killer phenotype expressed by Saccharomyces cerevisiae strain 28 differs from that of the more extensively studied K1 and K2 killers with respect to immunity, mode of toxin action and cell wall primary toxin receptor. We previously demonstrated that the M28 and L28 dsRNAs found in strain 28 are present in virus-like particles (VLPs) and that transfection with these VLPs is sufficient to confer the complete K28 phenotype on a dsRNA-free recipient cell. We also demonstrated that L28, like the L-A-H species in K1 killers, has [HOK] activity required for maintenance of M1-dsRNA, and predicted that M28 would share with M1 dependence on L-A for replication. We now confirm this prediction by g…

Saccharomyces cerevisiae ProteinsSaccharomyces cerevisiaeClone (cell biology)BioengineeringSaccharomyces cerevisiaeBiologyApplied Microbiology and BiotechnologyBiochemistryVirusFungal ProteinsGeneticsRNA Double-StrandedGeneticsTransfectionMycotoxinsbiology.organism_classificationPhenotypeFusion proteinKiller Factors YeastRNA silencingPhenotypeCapsidMutationVirusesRNA ViralBiotechnologyYeast
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Lateral reorganization of plasma membrane is involved in the yeast resistance to severe dehydration

2010

International audience; In this study, we investigated the kinetic and the magnitude of dehydrations on yeast plasma membrane (PM) modifications because this parameter is crucial to cell survival. Functional (permeability) and structural (morphology, ultrastructure, and distribution of the protein Sur7-GFP contained in sterol-rich membrane microdomains) PM modifications were investigated by confocal and electron microscopy after progressive (non-lethal) and rapid (lethal) hyperosmotic perturbations. Rapid cell dehydration induced the formation of many PM invaginations followed by membrane internalization of low sterol content PM regions with time. Permeabilization of the plasma membrane occ…

Saccharomyces cerevisiae Proteins[SDV.BIO]Life Sciences [q-bio]/BiotechnologyRecombinant Fusion Proteinsmedia_common.quotation_subjectCellBiophysicsSaccharomyces cerevisiaeBiologyBiochemistryCell survivallaw.invention[SPI]Engineering Sciences [physics][ SDV.MP ] Life Sciences [q-bio]/Microbiology and ParasitologylawElectron microscopymedicine[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process EngineeringMicrodomainDehydration kineticInternalizationEisosomemedia_commonDehydrationOsmotic concentrationCell MembraneOsmolar ConcentrationLipid microdomainMembrane ProteinsWaterCell BiologyEndocytosisCell biologyConfocal microscopy[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitologymedicine.anatomical_structureMembraneUltrastructureElectron microscopeBiochimica et Biophysica Acta (BBA) - Biomembranes
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Evaluation of the SOS/umu-test post-treatment assay for the detection of genotoxic activities of pure compounds and complex environmental mixtures.

2000

This study presents an evaluation of the SOS/umu-test after introducing an additional dilution and incubation in the post-treatment assay. This treatment reduces the influence of coloured test compounds that otherwise affect the colorimetric determination of the beta-galactosidase activity and the bacterial growth measurement during the testing of complex environmental samples. The post-treatment assay significantly increased the beta-galactosidase activity and consequently the enzyme induction ratios at higher doses of model genotoxins 4-nitroquinoline-N-oxide, N-methyl-N'-nitro-N-nitrosoguanidine, 2-aminoanthracene, benzo(a)pyrene with low or no effect on the sensitivity of the test itsel…

Salmonella typhimuriumMethylnitronitrosoguanidineHealth Toxicology and MutagenesisSegmented filamentous bacteriaRecombinant Fusion ProteinsSOS/umu-test; post-treatment assay; S.typhimurium; SOS response; genotoxicity assay; filamentous bacteria; environmental pollutionEnvironmental pollutionDNA-Directed DNA PolymeraseBacterial growthBiologyMicrobiologyAmes testBacterial ProteinsGeneticsBenzo(a)pyreneFood scienceSOS responseSOS Response GeneticsIncubationAnthracenesDose-Response Relationship DrugMutagenicity TestsEscherichia coli Proteinsbiology.organism_classificationbeta-Galactosidase4-Nitroquinoline-1-oxideSOS chromotestEnvironmental PollutantsBacteriaCell DivisionMutagensMutation research
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Misure di agglomerazione spaziale nei Sistemi Locali del Lavoro siciliani

2009

Spatial agglomeration indicators in the Sicilian Local Labour Systems Objectives - This paper examines the links among productive specialization, variety of the economic environment and knowledge spillovers on the basis of the territorial analyses present in the current literature. With the aim of identifying localization benefits in a particular area, some aspects of business settling are compared with trends in the development of economic activities and, particularly, with agglomeration process of the firms. Methods and Results The empirical analysis will be carried out pointing to the dynamics of employment consequent to the effects of the externalities above mentioned. Employment data a…

Service (business)Competition (economics)Index (economics)EconomyEconomic indicatorEconomies of agglomerationEconomicsGeneral Earth and Planetary SciencesEconomic geographyRedistribution (cultural anthropology)Diffusion of innovationsExternalityGeneral Environmental ScienceRIVISTA DI ECONOMIA E STATISTICA DEL TERRITORIO
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La città di Alphabet. Architettura per prosumers.

2021

Attraverso alcuni aspetti salienti dell’ideazione, della produzione e dell’opposizione al progetto del Toronto Quayside di Sidewalk labs, l’articolo discute l’influenza delle infrastrutture digitali per l’informazione sul progetto della casa e del quartiere. L’ampliamento delle attività svolte da remoto nello spazio domestico, enfatizzato dal quotidiano della pandemia da Covid 19, costituisce per gli oligopolisti planetari degli urban data come Alphabet un utile volano pubblicitario e un acceleratore. La fusione dei nuovi vessilli della tecnoemancipazione e della sostenibilità in ipotesi sperimentali che mirano a costruirsi sia per intero che per parti realizza un nuovo orizzonte in cui lo …

Settore ICAR/14 - Composizione Architettonica E UrbanaTaking into account some salient aspects of the conception production and opposition to the Toronto Quayside project by Sidewalk labs the article discusses the influence of urban data-digital infrastructures on the architectural design of the house and the neighbourhood. The extension of remote control on the practices of everyday life in the domestic space emphasized by the daily Covid 19 pandemic constitutes a useful advertising reference and an accelerator for the planetary oligopolists of urban data such as Alphabet. The fusion of the new emblems of techno-emancipation and sustainability in experimental hypotheses that can be built both in whole or in parts draws a new horizon in which the domestic space generates a technological profit and the inhabitants are transformed into producers. From a historical perspective our reality eclipses the idea of technology as an anonymous contribution to collective progress demonstrated by Giedion in Mechanization takes command and subverts the allegorical value assigned by the Architecture of the Seventies to the relational utopias of the Web Stem and Cluster.
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